Bioinformatics practice

Identify the source of your sequence and the location of the fragment represented by this sequence in the protein.
If the source protein is not annotated, find a similar annotated protein to infer the biological significance of your fragment.
Check if the three-dimensional structure of your fragment is known.
Predict secondary structure for the selected sequence.
Predict three-dimensional structure for the selected sequence using homology modeling.
Analyze the quality of your model using one of the structure assessment tools.
Provide structural classification for your model.
Create a visualization of your model highlighting and annotating one of the important molecular or biological features.
Compare predicted secondary structure with the secondary structure in 3D model and interpret the results.